Software

I have developed and maintained softwares on my GitHub page.

  • VCM: An efficiently implemented R package for variance components estimation. The software provides 3 algorithms for fitting the variance components model, including the Expectation-Maximization algorithm, the Minorization-Maximization algorithm, and the Method of Moments.
  • XPASS: An R package for constructing genetic prediction of polygenic traits by leveraging cross-population datasets from GWAS summary data.
  • iGREX: An R package for the IGREX model that provides efficient quantification of the impact of genetically regulated expression on complex traits and diseases.
  • bivas: An R package for a scalable Bayesian bi-level variable selection model.